Kainmueller Lab
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PatchPerPix
PatchPerPix Publicofficial implementation of the PatchPerPix instance segmentation method
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Pathology-Foundation-Model-Benchmark
Pathology-Foundation-Model-Benchmark PublicBenchmarking the ability of pathology foundation models to do cell type classification
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PatchPerPix_experiments
PatchPerPix_experiments Public archiveexperiments script for the PatchPerPix instance segmentation method
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evaluate-instance-segmentation
evaluate-instance-segmentation PublicEvaluation scripts for nuclei instance segmentation in 2d and 3d
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shift_equivariance_unet
shift_equivariance_unet PublicHow Shift Equivariance Impacts Metric Learning for Instance Segmentation
Repositories
- review_vit_xai Public
- arctique Public
- aqqua Public
- aggrigator Public
- Pathology-Foundation-Model-Benchmark Public
Benchmarking the ability of pathology foundation models to do cell type classification
- Evaluate-Graph-Metrics Public
Evaluate the similarity between two graphs, e.g. ground truth vs predicted skeletons of blood vessel segmentation.
- Vesselpose Public
Vessel Graph Reconstruction from Learned Voxel-wise Direction Vectors in 3D Vascular Images
- fisbe Public
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